dbCAN Logo

Cluster: HRGMv2_0811_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0811_26 HRGMv2_0811_26_18 18643 19680 - 3.A.1.11.1
TC HRGMv2_0811_26 HRGMv2_0811_26_19 19731 20516 - 3.A.1.11.2
TC HRGMv2_0811_26 HRGMv2_0811_26_20 20532 21398 - 3.A.1.11.1
TC HRGMv2_0811_26 HRGMv2_0811_26_21 21411 22484 - 3.A.1.11.1
TC HRGMv2_0811_26 HRGMv2_0811_26_22 22679 23266 + 9.B.18.1.2
pfam HRGMv2_0811_26 HRGMv2_0811_26_23 23263 24126 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4
CAZyme HRGMv2_0811_26 HRGMv2_0811_26_24 24120 25202 + GT4
TC HRGMv2_0811_26 HRGMv2_0811_26_25 25225 26637 + 2.A.66.1.28
Gene ID: HRGMv2_0811_26_18
Type: TC
Location: 18643 - 19680 (-)
Gene ID: HRGMv2_0811_26_19
Type: TC
Location: 19731 - 20516 (-)
Gene ID: HRGMv2_0811_26_20
Type: TC
Location: 20532 - 21398 (-)
Gene ID: HRGMv2_0811_26_21
Type: TC
Location: 21411 - 22484 (-)
Gene ID: HRGMv2_0811_26_22
Type: TC
Location: 22679 - 23266 (+)
Gene ID: HRGMv2_0811_26_23
Type: pfam
Location: 23263 - 24126 (+)
Gene ID: HRGMv2_0811_26_24
Type: CAZyme
Location: 24120 - 25202 (+)
Gene ID: HRGMv2_0811_26_25
Type: TC
Location: 25225 - 26637 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List