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Cluster: HRGMv2_0811_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0811_22 HRGMv2_0811_22_21 30797 32083 + GH109
pfam HRGMv2_0811_22 HRGMv2_0811_22_22 32100 32732 + UPF0047
STP HRGMv2_0811_22 HRGMv2_0811_22_23 32734 33333 + SIS
TC HRGMv2_0811_22 HRGMv2_0811_22_24 33602 35293 + 8.A.59.2.1
STP HRGMv2_0811_22 HRGMv2_0811_22_25 35385 36683 + SBP_bac_1
TC HRGMv2_0811_22 HRGMv2_0811_22_26 36788 37693 + 3.A.1.1.11
TC HRGMv2_0811_22 HRGMv2_0811_22_27 37706 38524 + 3.A.1.1.6
Gene ID: HRGMv2_0811_22_21
Type: CAZyme
Location: 30797 - 32083 (+)
Gene ID: HRGMv2_0811_22_22
Type: pfam
Location: 32100 - 32732 (+)
Gene ID: HRGMv2_0811_22_23
Type: STP
Location: 32734 - 33333 (+)
Gene ID: HRGMv2_0811_22_24
Type: TC
Location: 33602 - 35293 (+)
Gene ID: HRGMv2_0811_22_25
Type: STP
Location: 35385 - 36683 (+)
Gene ID: HRGMv2_0811_22_26
Type: TC
Location: 36788 - 37693 (+)
Gene ID: HRGMv2_0811_22_27
Type: TC
Location: 37706 - 38524 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0811_22_22 vegetarian > vegan 1.07858 0.00455

🧭 Explore Read Mapping of CGC

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