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Cluster: HRGMv2_0811_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0811_16 HRGMv2_0811_16_49 37143 38111 - 3.A.1.5.13
TC HRGMv2_0811_16 HRGMv2_0811_16_50 38112 39083 - 3.A.1.5.13
TC HRGMv2_0811_16 HRGMv2_0811_16_51 39086 39922 - 3.A.1.5.13
TC HRGMv2_0811_16 HRGMv2_0811_16_52 39936 40934 - 3.A.1.5.13
TC HRGMv2_0811_16 HRGMv2_0811_16_53 41119 42993 - 3.A.1.5.13
pfam HRGMv2_0811_16 HRGMv2_0811_16_54 43429 44766 - ELFV_dehydrog | ELFV_dehydrog_N
pfam HRGMv2_0811_16 HRGMv2_0811_16_55 45063 46073 + AsnA
CAZyme HRGMv2_0811_16 HRGMv2_0811_16_56 46333 47388 - GH179
Gene ID: HRGMv2_0811_16_49
Type: TC
Location: 37143 - 38111 (-)
Gene ID: HRGMv2_0811_16_50
Type: TC
Location: 38112 - 39083 (-)
Gene ID: HRGMv2_0811_16_51
Type: TC
Location: 39086 - 39922 (-)
Gene ID: HRGMv2_0811_16_52
Type: TC
Location: 39936 - 40934 (-)
Gene ID: HRGMv2_0811_16_53
Type: TC
Location: 41119 - 42993 (-)
Gene ID: HRGMv2_0811_16_54
Type: pfam
Location: 43429 - 44766 (-)
Gene ID: HRGMv2_0811_16_55
Type: pfam
Location: 45063 - 46073 (+)
Gene ID: HRGMv2_0811_16_56
Type: CAZyme
Location: 46333 - 47388 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0811_16_56 vegan > omnivore 1.42663 0.00566

🧭 Explore Read Mapping of CGC

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