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Cluster: HRGMv2_0811_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0811_8 HRGMv2_0811_8_36 48905 49588 + 2.A.78.1.1
pfam HRGMv2_0811_8 HRGMv2_0811_8_37 49585 49905 + AzlD
TF HRGMv2_0811_8 HRGMv2_0811_8_38 49964 50905 + HTH_5
CAZyme HRGMv2_0811_8 HRGMv2_0811_8_39 51095 52852 + GH2
TC HRGMv2_0811_8 HRGMv2_0811_8_40 53107 54402 + 3.A.1.1.36
TC HRGMv2_0811_8 HRGMv2_0811_8_41 54521 55444 + 3.A.1.1.36
TC HRGMv2_0811_8 HRGMv2_0811_8_42 55446 56312 + 3.A.1.1.36
NULL(UNKNOWN) HRGMv2_0811_8 HRGMv2_0811_8_43 56370 57404 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0811_8 HRGMv2_0811_8_44 57423 58013 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0811_8 HRGMv2_0811_8_45 58360 59535 + 3.A.1.4.2
TC HRGMv2_0811_8 HRGMv2_0811_8_46 59631 60509 + 3.A.1.4.10
TC HRGMv2_0811_8 HRGMv2_0811_8_47 60519 61634 + 3.A.1.4.8
TC HRGMv2_0811_8 HRGMv2_0811_8_48 61631 62467 + 3.A.1.4.10
TC HRGMv2_0811_8 HRGMv2_0811_8_49 62464 63183 + 3.A.1.4.10
pfam HRGMv2_0811_8 HRGMv2_0811_8_50 63618 64469 - AP_endonuc_2
CAZyme HRGMv2_0811_8 HRGMv2_0811_8_51 64481 65554 - GH179
Gene ID: HRGMv2_0811_8_36
Type: TC
Location: 48905 - 49588 (+)
Gene ID: HRGMv2_0811_8_37
Type: pfam
Location: 49585 - 49905 (+)
Gene ID: HRGMv2_0811_8_38
Type: TF
Location: 49964 - 50905 (+)
Gene ID: HRGMv2_0811_8_39
Type: CAZyme
Location: 51095 - 52852 (+)
Gene ID: HRGMv2_0811_8_40
Type: TC
Location: 53107 - 54402 (+)
Gene ID: HRGMv2_0811_8_41
Type: TC
Location: 54521 - 55444 (+)
Gene ID: HRGMv2_0811_8_42
Type: TC
Location: 55446 - 56312 (+)
Gene ID: HRGMv2_0811_8_43
Type:
Location: 56370 - 57404 (+)
Gene ID: HRGMv2_0811_8_44
Type:
Location: 57423 - 58013 (+)
Gene ID: HRGMv2_0811_8_45
Type: TC
Location: 58360 - 59535 (+)
Gene ID: HRGMv2_0811_8_46
Type: TC
Location: 59631 - 60509 (+)
Gene ID: HRGMv2_0811_8_47
Type: TC
Location: 60519 - 61634 (+)
Gene ID: HRGMv2_0811_8_48
Type: TC
Location: 61631 - 62467 (+)
Gene ID: HRGMv2_0811_8_49
Type: TC
Location: 62464 - 63183 (+)
Gene ID: HRGMv2_0811_8_50
Type: pfam
Location: 63618 - 64469 (-)
Gene ID: HRGMv2_0811_8_51
Type: CAZyme
Location: 64481 - 65554 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0811_8_48 vegetarian > vegan 1.07822 0.00455

🧭 Explore Read Mapping of CGC

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