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Cluster: HRGMv2_0811_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0811_7 HRGMv2_0811_7_79 87414 88733 + GH4
NULL(UNKNOWN) HRGMv2_0811_7 HRGMv2_0811_7_80 88850 89827 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0811_7 HRGMv2_0811_7_81 89840 91471 - 2.A.50.2.1
pfam HRGMv2_0811_7 HRGMv2_0811_7_82 91475 91705 - PP-binding
pfam HRGMv2_0811_7 HRGMv2_0811_7_83 91708 92889 - Orn_DAP_Arg_deC | Ala_racemase_N | Orn_Arg_deC_N
TC HRGMv2_0811_7 HRGMv2_0811_7_84 92886 94406 - 4.C.1.1.4
pfam HRGMv2_0811_7 HRGMv2_0811_7_85 94468 94896 - GtrA_DPMS_TM
TC HRGMv2_0811_7 HRGMv2_0811_7_86 95306 97000 + 8.A.59.2.1
TC HRGMv2_0811_7 HRGMv2_0811_7_87 97142 98062 + 3.A.1.1.10
TC HRGMv2_0811_7 HRGMv2_0811_7_88 98080 98967 + 3.A.1.1.29
Gene ID: HRGMv2_0811_7_79
Type: CAZyme
Location: 87414 - 88733 (+)
Gene ID: HRGMv2_0811_7_80
Type:
Location: 88850 - 89827 (-)
Gene ID: HRGMv2_0811_7_81
Type: TC
Location: 89840 - 91471 (-)
Gene ID: HRGMv2_0811_7_82
Type: pfam
Location: 91475 - 91705 (-)
Gene ID: HRGMv2_0811_7_83
Type: pfam
Location: 91708 - 92889 (-)
Gene ID: HRGMv2_0811_7_84
Type: TC
Location: 92886 - 94406 (-)
Gene ID: HRGMv2_0811_7_85
Type: pfam
Location: 94468 - 94896 (-)
Gene ID: HRGMv2_0811_7_86
Type: TC
Location: 95306 - 97000 (+)
Gene ID: HRGMv2_0811_7_87
Type: TC
Location: 97142 - 98062 (+)
Gene ID: HRGMv2_0811_7_88
Type: TC
Location: 98080 - 98967 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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