Cluster: HRGMv2_0808_CGC6
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0808
- CGC Family ID: CGCFAM_06042
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0808_3 | HRGMv2_0808_3_135 | 140821 | 141786 | - | 3.A.1.2.12 |
| TC | HRGMv2_0808_3 | HRGMv2_0808_3_136 | 141791 | 142855 | - | 3.A.1.2.10 |
| TC | HRGMv2_0808_3 | HRGMv2_0808_3_137 | 142849 | 144384 | - | 3.A.1.2.17 |
| pfam | HRGMv2_0808_3 | HRGMv2_0808_3_138 | 144479 | 145612 | - | Bmp |
| STP | HRGMv2_0808_3 | HRGMv2_0808_3_139 | 145672 | 146247 | - | Pribosyltran |
| CAZyme | HRGMv2_0808_3 | HRGMv2_0808_3_140 | 146437 | 147237 | + | CE4 |
| NULL(UNKNOWN) | HRGMv2_0808_3 | HRGMv2_0808_3_141 | 147365 | 147748 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0808_3 | HRGMv2_0808_3_142 | 147782 | 148642 | - | CE4 |
| TC | HRGMv2_0808_3 | HRGMv2_0808_3_143 | 148733 | 149533 | - | 3.A.1.24.5 |
| TC | HRGMv2_0808_3 | HRGMv2_0808_3_144 | 149573 | 150241 | - | 3.A.1.24.5 |
| TC | HRGMv2_0808_3 | HRGMv2_0808_3_145 | 150238 | 151251 | - | 3.A.1.24.2 |
| pfam | HRGMv2_0808_3 | HRGMv2_0808_3_146 | 151494 | 154583 | + | YDG | YDG |
| pfam | HRGMv2_0808_3 | HRGMv2_0808_3_147 | 154667 | 155578 | - | Transpeptidase |
| TC | HRGMv2_0808_3 | HRGMv2_0808_3_148 | 155671 | 156726 | - | 3.A.1.6.2 |
Gene ID: HRGMv2_0808_3_135
Type: TC
Location: 140821 - 141786 (-)
Type: TC
Location: 140821 - 141786 (-)
Gene ID: HRGMv2_0808_3_136
Type: TC
Location: 141791 - 142855 (-)
Type: TC
Location: 141791 - 142855 (-)
Gene ID: HRGMv2_0808_3_137
Type: TC
Location: 142849 - 144384 (-)
Type: TC
Location: 142849 - 144384 (-)
Gene ID: HRGMv2_0808_3_138
Type: pfam
Location: 144479 - 145612 (-)
Type: pfam
Location: 144479 - 145612 (-)
Gene ID: HRGMv2_0808_3_139
Type: STP
Location: 145672 - 146247 (-)
Type: STP
Location: 145672 - 146247 (-)
Gene ID: HRGMv2_0808_3_140
Type: CAZyme
Location: 146437 - 147237 (+)
Type: CAZyme
Location: 146437 - 147237 (+)
Gene ID: HRGMv2_0808_3_141
Type:
Location: 147365 - 147748 (+)
Type:
Location: 147365 - 147748 (+)
Gene ID: HRGMv2_0808_3_142
Type: CAZyme
Location: 147782 - 148642 (-)
Type: CAZyme
Location: 147782 - 148642 (-)
Gene ID: HRGMv2_0808_3_143
Type: TC
Location: 148733 - 149533 (-)
Type: TC
Location: 148733 - 149533 (-)
Gene ID: HRGMv2_0808_3_144
Type: TC
Location: 149573 - 150241 (-)
Type: TC
Location: 149573 - 150241 (-)
Gene ID: HRGMv2_0808_3_145
Type: TC
Location: 150238 - 151251 (-)
Type: TC
Location: 150238 - 151251 (-)
Gene ID: HRGMv2_0808_3_146
Type: pfam
Location: 151494 - 154583 (+)
Type: pfam
Location: 151494 - 154583 (+)
Gene ID: HRGMv2_0808_3_147
Type: pfam
Location: 154667 - 155578 (-)
Type: pfam
Location: 154667 - 155578 (-)
Gene ID: HRGMv2_0808_3_148
Type: TC
Location: 155671 - 156726 (-)
Type: TC
Location: 155671 - 156726 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
QAND01
Genus
UMGS1975
Species
UMGS1975 sp900546685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.