Cluster: HRGMv2_0797_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0797
- CGC Family ID: CGCFAM_00232
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0797_1 | HRGMv2_0797_1_190 | 230864 | 231898 | + | 3.A.1.1.10 |
| TC | HRGMv2_0797_1 | HRGMv2_0797_1_191 | 231895 | 232851 | + | 3.A.1.1.29 |
| STP | HRGMv2_0797_1 | HRGMv2_0797_1_192 | 232877 | 234607 | + | SBP_bac_1 |
| NULL(UNKNOWN) | HRGMv2_0797_1 | HRGMv2_0797_1_193 | 234604 | 235074 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0797_1 | HRGMv2_0797_1_194 | 235152 | 237062 | + | GH136 |
| pfam | HRGMv2_0797_1 | HRGMv2_0797_1_195 | 237081 | 243170 | + | Big_2 | Big_2 |
| CAZyme | HRGMv2_0797_1 | HRGMv2_0797_1_196 | 243780 | 246425 | + | GH3 |
Gene ID: HRGMv2_0797_1_190
Type: TC
Location: 230864 - 231898 (+)
Type: TC
Location: 230864 - 231898 (+)
Gene ID: HRGMv2_0797_1_191
Type: TC
Location: 231895 - 232851 (+)
Type: TC
Location: 231895 - 232851 (+)
Gene ID: HRGMv2_0797_1_192
Type: STP
Location: 232877 - 234607 (+)
Type: STP
Location: 232877 - 234607 (+)
Gene ID: HRGMv2_0797_1_193
Type:
Location: 234604 - 235074 (+)
Type:
Location: 234604 - 235074 (+)
Gene ID: HRGMv2_0797_1_194
Type: CAZyme
Location: 235152 - 237062 (+)
Type: CAZyme
Location: 235152 - 237062 (+)
Gene ID: HRGMv2_0797_1_195
Type: pfam
Location: 237081 - 243170 (+)
Type: pfam
Location: 237081 - 243170 (+)
Gene ID: HRGMv2_0797_1_196
Type: CAZyme
Location: 243780 - 246425 (+)
Type: CAZyme
Location: 243780 - 246425 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900767465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.