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Cluster: HRGMv2_0797_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0797_1 HRGMv2_0797_1_151 176766 178628 + GH127
TF HRGMv2_0797_1 HRGMv2_0797_1_152 178782 179477 + HTH_3
CAZyme HRGMv2_0797_1 HRGMv2_0797_1_153 180074 187345 + GH94 | GT84
STP HRGMv2_0797_1 HRGMv2_0797_1_154 187457 188767 + AAA
TC HRGMv2_0797_1 HRGMv2_0797_1_155 188822 189640 + 3.A.1.147.1
pfam HRGMv2_0797_1 HRGMv2_0797_1_156 189637 191355 + ABC_tran_2
peptidase HRGMv2_0797_1 HRGMv2_0797_1_157 191426 192502 + S12.UPW
TC HRGMv2_0797_1 HRGMv2_0797_1_158 192534 193868 + 9.A.8.1.2
TC HRGMv2_0797_1 HRGMv2_0797_1_159 193871 194638 + 9.B.31.1.1
Gene ID: HRGMv2_0797_1_151
Type: CAZyme
Location: 176766 - 178628 (+)
Gene ID: HRGMv2_0797_1_152
Type: TF
Location: 178782 - 179477 (+)
Gene ID: HRGMv2_0797_1_153
Type: CAZyme
Location: 180074 - 187345 (+)
Gene ID: HRGMv2_0797_1_154
Type: STP
Location: 187457 - 188767 (+)
Gene ID: HRGMv2_0797_1_155
Type: TC
Location: 188822 - 189640 (+)
Gene ID: HRGMv2_0797_1_156
Type: pfam
Location: 189637 - 191355 (+)
Gene ID: HRGMv2_0797_1_157
Type: peptidase
Location: 191426 - 192502 (+)
Gene ID: HRGMv2_0797_1_158
Type: TC
Location: 192534 - 193868 (+)
Gene ID: HRGMv2_0797_1_159
Type: TC
Location: 193871 - 194638 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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