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Cluster: HRGMv2_0797_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0797_16 HRGMv2_0797_16_10 8713 11109 + 3.A.9.1.2
pfam HRGMv2_0797_16 HRGMv2_0797_16_11 11216 11749 + Ribosomal_S30AE | Ribosom_S30AE_C
pfam HRGMv2_0797_16 HRGMv2_0797_16_12 11839 13230 + PGI
TC HRGMv2_0797_16 HRGMv2_0797_16_13 13648 16110 + 3.A.3.5.15
pfam HRGMv2_0797_16 HRGMv2_0797_16_14 16901 17608 + MazG
pfam HRGMv2_0797_16 HRGMv2_0797_16_15 17605 18540 + Dus
CAZyme HRGMv2_0797_16 HRGMv2_0797_16_16 18684 21536 + GH2
Gene ID: HRGMv2_0797_16_10
Type: TC
Location: 8713 - 11109 (+)
Gene ID: HRGMv2_0797_16_11
Type: pfam
Location: 11216 - 11749 (+)
Gene ID: HRGMv2_0797_16_12
Type: pfam
Location: 11839 - 13230 (+)
Gene ID: HRGMv2_0797_16_13
Type: TC
Location: 13648 - 16110 (+)
Gene ID: HRGMv2_0797_16_14
Type: pfam
Location: 16901 - 17608 (+)
Gene ID: HRGMv2_0797_16_15
Type: pfam
Location: 17605 - 18540 (+)
Gene ID: HRGMv2_0797_16_16
Type: CAZyme
Location: 18684 - 21536 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0797_16_12 vegetarian > vegan 2.39246 0.01332

🧭 Explore Read Mapping of CGC

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