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Cluster: HRGMv2_0793_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0793_2 HRGMv2_0793_2_3 3211 5709 - CBM32 | GH130
CAZyme HRGMv2_0793_2 HRGMv2_0793_2_4 5711 8119 - CBM38 | GH125
pfam HRGMv2_0793_2 HRGMv2_0793_2_5 8127 13298 - CBM_X2 | Big_9
CAZyme HRGMv2_0793_2 HRGMv2_0793_2_6 13476 14516 - GH130_4
TF HRGMv2_0793_2 HRGMv2_0793_2_7 14517 15392 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) HRGMv2_0793_2 HRGMv2_0793_2_8 15385 16260 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0793_2 HRGMv2_0793_2_9 16288 17733 - 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_0793_2 HRGMv2_0793_2_10 17708 19477 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0793_2 HRGMv2_0793_2_11 19493 20395 - 3.A.1.1.29
TC HRGMv2_0793_2 HRGMv2_0793_2_12 20397 21338 - 3.A.1.1.10
CAZyme HRGMv2_0793_2 HRGMv2_0793_2_13 21316 22275 - GT108
Gene ID: HRGMv2_0793_2_3
Type: CAZyme
Location: 3211 - 5709 (-)
Gene ID: HRGMv2_0793_2_4
Type: CAZyme
Location: 5711 - 8119 (-)
Gene ID: HRGMv2_0793_2_5
Type: pfam
Location: 8127 - 13298 (-)
Gene ID: HRGMv2_0793_2_6
Type: CAZyme
Location: 13476 - 14516 (-)
Gene ID: HRGMv2_0793_2_7
Type: TF
Location: 14517 - 15392 (-)
Gene ID: HRGMv2_0793_2_8
Type:
Location: 15385 - 16260 (-)
Gene ID: HRGMv2_0793_2_9
Type: TC
Location: 16288 - 17733 (-)
Gene ID: HRGMv2_0793_2_10
Type:
Location: 17708 - 19477 (-)
Gene ID: HRGMv2_0793_2_11
Type: TC
Location: 19493 - 20395 (-)
Gene ID: HRGMv2_0793_2_12
Type: TC
Location: 20397 - 21338 (-)
Gene ID: HRGMv2_0793_2_13
Type: CAZyme
Location: 21316 - 22275 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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