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Cluster: HRGMv2_0793_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0793_14 HRGMv2_0793_14_2 2572 4752 + GH36
NULL(UNKNOWN) HRGMv2_0793_14 HRGMv2_0793_14_3 4758 6035 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0793_14 HRGMv2_0793_14_4 6200 7093 - 0035607
CAZyme HRGMv2_0793_14 HRGMv2_0793_14_5 7378 10269 + GH43
pfam HRGMv2_0793_14 HRGMv2_0793_14_6 10400 14074 + PEGA
CAZyme HRGMv2_0793_14 HRGMv2_0793_14_7 14329 16296 + GH3
NULL(UNKNOWN) HRGMv2_0793_14 HRGMv2_0793_14_8 16403 18253 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0793_14 HRGMv2_0793_14_9 18250 19197 + 3.A.1.1.11
TC HRGMv2_0793_14 HRGMv2_0793_14_10 19199 20116 + 3.A.1.1.34
pfam HRGMv2_0793_14 HRGMv2_0793_14_11 20344 21618 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_0793_14 HRGMv2_0793_14_12 21752 24289 + GH31_15
pfam HRGMv2_0793_14 HRGMv2_0793_14_13 24475 25536 + Lipase_GDSL_2
CAZyme HRGMv2_0793_14 HRGMv2_0793_14_14 25533 28382 + GH2
pfam HRGMv2_0793_14 HRGMv2_0793_14_15 28392 29225 + Lactamase_B_2
pfam HRGMv2_0793_14 HRGMv2_0793_14_16 29234 30079 + PHP
CAZyme HRGMv2_0793_14 HRGMv2_0793_14_17 30225 31958 + GH2
Gene ID: HRGMv2_0793_14_2
Type: CAZyme
Location: 2572 - 4752 (+)
Gene ID: HRGMv2_0793_14_3
Type:
Location: 4758 - 6035 (+)
Gene ID: HRGMv2_0793_14_4
Type: TF
Location: 6200 - 7093 (-)
Gene ID: HRGMv2_0793_14_5
Type: CAZyme
Location: 7378 - 10269 (+)
Gene ID: HRGMv2_0793_14_6
Type: pfam
Location: 10400 - 14074 (+)
Gene ID: HRGMv2_0793_14_7
Type: CAZyme
Location: 14329 - 16296 (+)
Gene ID: HRGMv2_0793_14_8
Type:
Location: 16403 - 18253 (+)
Gene ID: HRGMv2_0793_14_9
Type: TC
Location: 18250 - 19197 (+)
Gene ID: HRGMv2_0793_14_10
Type: TC
Location: 19199 - 20116 (+)
Gene ID: HRGMv2_0793_14_11
Type: pfam
Location: 20344 - 21618 (+)
Gene ID: HRGMv2_0793_14_12
Type: CAZyme
Location: 21752 - 24289 (+)
Gene ID: HRGMv2_0793_14_13
Type: pfam
Location: 24475 - 25536 (+)
Gene ID: HRGMv2_0793_14_14
Type: CAZyme
Location: 25533 - 28382 (+)
Gene ID: HRGMv2_0793_14_15
Type: pfam
Location: 28392 - 29225 (+)
Gene ID: HRGMv2_0793_14_16
Type: pfam
Location: 29234 - 30079 (+)
Gene ID: HRGMv2_0793_14_17
Type: CAZyme
Location: 30225 - 31958 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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