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Cluster: HRGMv2_0793_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0793_11 HRGMv2_0793_11_18 24159 25832 + GH43_34
NULL(UNKNOWN) HRGMv2_0793_11 HRGMv2_0793_11_19 25829 27355 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0793_11 HRGMv2_0793_11_20 27479 29404 + SBP_bac_1
TC HRGMv2_0793_11 HRGMv2_0793_11_21 29424 30314 + 3.A.1.1.11
TC HRGMv2_0793_11 HRGMv2_0793_11_22 30304 31176 + 3.A.1.1.34
CAZyme HRGMv2_0793_11 HRGMv2_0793_11_23 31293 32198 + GH43_32
NULL(UNKNOWN) HRGMv2_0793_11 HRGMv2_0793_11_24 32256 33197 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0793_11 HRGMv2_0793_11_25 33338 34330 - Hydrolase | HAD_2
CAZyme HRGMv2_0793_11 HRGMv2_0793_11_26 34498 37329 - GH38
pfam HRGMv2_0793_11 HRGMv2_0793_11_27 37503 38984 + GxGYxYP_C | GxGYxYP_N_3rd
TF HRGMv2_0793_11 HRGMv2_0793_11_28 39207 40190 + LacI
TC HRGMv2_0793_11 HRGMv2_0793_11_29 40440 41672 + 3.A.1.1.16
TC HRGMv2_0793_11 HRGMv2_0793_11_30 41736 42650 + 3.A.1.1.34
TC HRGMv2_0793_11 HRGMv2_0793_11_31 42643 43500 + 3.A.1.1.39
Gene ID: HRGMv2_0793_11_18
Type: CAZyme
Location: 24159 - 25832 (+)
Gene ID: HRGMv2_0793_11_19
Type:
Location: 25829 - 27355 (+)
Gene ID: HRGMv2_0793_11_20
Type: STP
Location: 27479 - 29404 (+)
Gene ID: HRGMv2_0793_11_21
Type: TC
Location: 29424 - 30314 (+)
Gene ID: HRGMv2_0793_11_22
Type: TC
Location: 30304 - 31176 (+)
Gene ID: HRGMv2_0793_11_23
Type: CAZyme
Location: 31293 - 32198 (+)
Gene ID: HRGMv2_0793_11_24
Type:
Location: 32256 - 33197 (+)
Gene ID: HRGMv2_0793_11_25
Type: pfam
Location: 33338 - 34330 (-)
Gene ID: HRGMv2_0793_11_26
Type: CAZyme
Location: 34498 - 37329 (-)
Gene ID: HRGMv2_0793_11_27
Type: pfam
Location: 37503 - 38984 (+)
Gene ID: HRGMv2_0793_11_28
Type: TF
Location: 39207 - 40190 (+)
Gene ID: HRGMv2_0793_11_29
Type: TC
Location: 40440 - 41672 (+)
Gene ID: HRGMv2_0793_11_30
Type: TC
Location: 41736 - 42650 (+)
Gene ID: HRGMv2_0793_11_31
Type: TC
Location: 42643 - 43500 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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