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Cluster: HRGMv2_0793_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0793_3 HRGMv2_0793_3_54 83215 83943 - 9.B.143.2.3
TF HRGMv2_0793_3 HRGMv2_0793_3_55 84134 85024 + HTH_1
sulfatase HRGMv2_0793_3 HRGMv2_0793_3_56 85163 87178 - S1_4
CAZyme HRGMv2_0793_3 HRGMv2_0793_3_57 87189 89708 - GH31_16 | GH31_20
NULL(UNKNOWN) HRGMv2_0793_3 HRGMv2_0793_3_58 89733 91475 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0793_3 HRGMv2_0793_3_59 91489 93198 - 3.A.1.1.22
TC HRGMv2_0793_3 HRGMv2_0793_3_60 93208 94131 - 3.A.1.1.26
pfam HRGMv2_0793_3 HRGMv2_0793_3_61 94091 95074 - BPD_transp_1
STP HRGMv2_0793_3 HRGMv2_0793_3_62 95088 96560 - SBP_bac_1
CAZyme HRGMv2_0793_3 HRGMv2_0793_3_63 96577 98595 - GH97
Gene ID: HRGMv2_0793_3_54
Type: TC
Location: 83215 - 83943 (-)
Gene ID: HRGMv2_0793_3_55
Type: TF
Location: 84134 - 85024 (+)
Gene ID: HRGMv2_0793_3_56
Type: sulfatase
Location: 85163 - 87178 (-)
Gene ID: HRGMv2_0793_3_57
Type: CAZyme
Location: 87189 - 89708 (-)
Gene ID: HRGMv2_0793_3_58
Type:
Location: 89733 - 91475 (-)
Gene ID: HRGMv2_0793_3_59
Type: TC
Location: 91489 - 93198 (-)
Gene ID: HRGMv2_0793_3_60
Type: TC
Location: 93208 - 94131 (-)
Gene ID: HRGMv2_0793_3_61
Type: pfam
Location: 94091 - 95074 (-)
Gene ID: HRGMv2_0793_3_62
Type: STP
Location: 95088 - 96560 (-)
Gene ID: HRGMv2_0793_3_63
Type: CAZyme
Location: 96577 - 98595 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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