Cluster: HRGMv2_0788_CGC1
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0788
- CGC Family ID: CGCFAM_04463
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0788_1 | HRGMv2_0788_1_78 | 98070 | 99974 | - | 3.A.1.1.26 |
| CAZyme | HRGMv2_0788_1 | HRGMv2_0788_1_79 | 100016 | 101620 | - | GH13_36 |
| TC | HRGMv2_0788_1 | HRGMv2_0788_1_80 | 101622 | 102590 | - | 3.A.1.1.27 |
| TC | HRGMv2_0788_1 | HRGMv2_0788_1_81 | 102587 | 104119 | - | 3.A.1.1.27 |
| STP | HRGMv2_0788_1 | HRGMv2_0788_1_82 | 104199 | 105479 | - | SBP_bac_1 |
| NULL(UNKNOWN) | HRGMv2_0788_1 | HRGMv2_0788_1_83 | 105564 | 107315 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0788_1 | HRGMv2_0788_1_84 | 107471 | 110104 | - | GH13_14 |
| TC | HRGMv2_0788_1 | HRGMv2_0788_1_85 | 111505 | 112233 | - | 9.B.18.1.2 |
| pfam | HRGMv2_0788_1 | HRGMv2_0788_1_86 | 112404 | 113333 | + | DAGK_cat |
| pfam | HRGMv2_0788_1 | HRGMv2_0788_1_87 | 113440 | 114276 | + | ABC2_membrane |
| TC | HRGMv2_0788_1 | HRGMv2_0788_1_88 | 114281 | 115150 | + | 3.A.1.103.5 |
| CAZyme | HRGMv2_0788_1 | HRGMv2_0788_1_89 | 115311 | 116207 | - | GT111 |
| CAZyme | HRGMv2_0788_1 | HRGMv2_0788_1_90 | 116204 | 117313 | - | GT4 |
| CAZyme | HRGMv2_0788_1 | HRGMv2_0788_1_91 | 117315 | 119048 | - | GT2 |
| STP | HRGMv2_0788_1 | HRGMv2_0788_1_92 | 119057 | 121204 | - | Fer4 |
| CAZyme | HRGMv2_0788_1 | HRGMv2_0788_1_93 | 121219 | 123156 | - | GT111 | GT8 |
Gene ID: HRGMv2_0788_1_78
Type: TC
Location: 98070 - 99974 (-)
Type: TC
Location: 98070 - 99974 (-)
Gene ID: HRGMv2_0788_1_79
Type: CAZyme
Location: 100016 - 101620 (-)
Type: CAZyme
Location: 100016 - 101620 (-)
Gene ID: HRGMv2_0788_1_80
Type: TC
Location: 101622 - 102590 (-)
Type: TC
Location: 101622 - 102590 (-)
Gene ID: HRGMv2_0788_1_81
Type: TC
Location: 102587 - 104119 (-)
Type: TC
Location: 102587 - 104119 (-)
Gene ID: HRGMv2_0788_1_82
Type: STP
Location: 104199 - 105479 (-)
Type: STP
Location: 104199 - 105479 (-)
Gene ID: HRGMv2_0788_1_83
Type:
Location: 105564 - 107315 (-)
Type:
Location: 105564 - 107315 (-)
Gene ID: HRGMv2_0788_1_84
Type: CAZyme
Location: 107471 - 110104 (-)
Type: CAZyme
Location: 107471 - 110104 (-)
Gene ID: HRGMv2_0788_1_85
Type: TC
Location: 111505 - 112233 (-)
Type: TC
Location: 111505 - 112233 (-)
Gene ID: HRGMv2_0788_1_86
Type: pfam
Location: 112404 - 113333 (+)
Type: pfam
Location: 112404 - 113333 (+)
Gene ID: HRGMv2_0788_1_87
Type: pfam
Location: 113440 - 114276 (+)
Type: pfam
Location: 113440 - 114276 (+)
Gene ID: HRGMv2_0788_1_88
Type: TC
Location: 114281 - 115150 (+)
Type: TC
Location: 114281 - 115150 (+)
Gene ID: HRGMv2_0788_1_89
Type: CAZyme
Location: 115311 - 116207 (-)
Type: CAZyme
Location: 115311 - 116207 (-)
Gene ID: HRGMv2_0788_1_90
Type: CAZyme
Location: 116204 - 117313 (-)
Type: CAZyme
Location: 116204 - 117313 (-)
Gene ID: HRGMv2_0788_1_91
Type: CAZyme
Location: 117315 - 119048 (-)
Type: CAZyme
Location: 117315 - 119048 (-)
Gene ID: HRGMv2_0788_1_92
Type: STP
Location: 119057 - 121204 (-)
Type: STP
Location: 119057 - 121204 (-)
Gene ID: HRGMv2_0788_1_93
Type: CAZyme
Location: 121219 - 123156 (-)
Type: CAZyme
Location: 121219 - 123156 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
CAG-475
Species
CAG-475 sp900549225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.