Cluster: HRGMv2_0786_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0786
- CGC Family ID: CGCFAM_01136
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0786_8 | HRGMv2_0786_8_5 | 5322 | 7277 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_0786_8 | HRGMv2_0786_8_6 | 7291 | 10278 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0786_8 | HRGMv2_0786_8_7 | 10302 | 11198 | - | 3.A.1.1.34 |
| pfam | HRGMv2_0786_8 | HRGMv2_0786_8_8 | 11209 | 12129 | - | BPD_transp_1 |
| NULL(UNKNOWN) | HRGMv2_0786_8 | HRGMv2_0786_8_9 | 12143 | 13858 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0786_8 | HRGMv2_0786_8_10 | 13878 | 15659 | - | GH2 |
Gene ID: HRGMv2_0786_8_5
Type: CAZyme
Location: 5322 - 7277 (-)
Type: CAZyme
Location: 5322 - 7277 (-)
Gene ID: HRGMv2_0786_8_6
Type:
Location: 7291 - 10278 (-)
Type:
Location: 7291 - 10278 (-)
Gene ID: HRGMv2_0786_8_7
Type: TC
Location: 10302 - 11198 (-)
Type: TC
Location: 10302 - 11198 (-)
Gene ID: HRGMv2_0786_8_8
Type: pfam
Location: 11209 - 12129 (-)
Type: pfam
Location: 11209 - 12129 (-)
Gene ID: HRGMv2_0786_8_9
Type:
Location: 12143 - 13858 (-)
Type:
Location: 12143 - 13858 (-)
Gene ID: HRGMv2_0786_8_10
Type: CAZyme
Location: 13878 - 15659 (-)
Type: CAZyme
Location: 13878 - 15659 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.