Cluster: HRGMv2_0786_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0786
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0786_41 | HRGMv2_0786_41_4 | 1402 | 4035 | + | 3.A.3.2.21 |
| CAZyme | HRGMv2_0786_41 | HRGMv2_0786_41_5 | 3992 | 4678 | - | CE4 |
| sulfatase | HRGMv2_0786_41 | HRGMv2_0786_41_6 | 4780 | 5820 | + | S1_22 |
| pfam | HRGMv2_0786_41 | HRGMv2_0786_41_7 | 6053 | 6628 | + | GrpE |
| TC | HRGMv2_0786_41 | HRGMv2_0786_41_8 | 6689 | 8488 | + | 1.A.33.1.4 |
Gene ID: HRGMv2_0786_41_4
Type: TC
Location: 1402 - 4035 (+)
Type: TC
Location: 1402 - 4035 (+)
Gene ID: HRGMv2_0786_41_5
Type: CAZyme
Location: 3992 - 4678 (-)
Type: CAZyme
Location: 3992 - 4678 (-)
Gene ID: HRGMv2_0786_41_6
Type: sulfatase
Location: 4780 - 5820 (+)
Type: sulfatase
Location: 4780 - 5820 (+)
Gene ID: HRGMv2_0786_41_7
Type: pfam
Location: 6053 - 6628 (+)
Type: pfam
Location: 6053 - 6628 (+)
Gene ID: HRGMv2_0786_41_8
Type: TC
Location: 6689 - 8488 (+)
Type: TC
Location: 6689 - 8488 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.