Cluster: HRGMv2_0786_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0786
- CGC Family ID: CGCFAM_04352
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0786_3 | HRGMv2_0786_3_35 | 44723 | 45712 | + | 3.A.1.1.49 |
| TC | HRGMv2_0786_3 | HRGMv2_0786_3_36 | 45709 | 46605 | + | 3.A.1.1.20 |
| STP | HRGMv2_0786_3 | HRGMv2_0786_3_37 | 46617 | 48164 | + | SBP_bac_1 |
| CAZyme | HRGMv2_0786_3 | HRGMv2_0786_3_38 | 48313 | 50421 | + | GH78 |
Gene ID: HRGMv2_0786_3_35
Type: TC
Location: 44723 - 45712 (+)
Type: TC
Location: 44723 - 45712 (+)
Gene ID: HRGMv2_0786_3_36
Type: TC
Location: 45709 - 46605 (+)
Type: TC
Location: 45709 - 46605 (+)
Gene ID: HRGMv2_0786_3_37
Type: STP
Location: 46617 - 48164 (+)
Type: STP
Location: 46617 - 48164 (+)
Gene ID: HRGMv2_0786_3_38
Type: CAZyme
Location: 48313 - 50421 (+)
Type: CAZyme
Location: 48313 - 50421 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.