Cluster: HRGMv2_0786_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0786
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0786_38 | HRGMv2_0786_38_3 | 1968 | 2912 | + | 3.A.1.1.4 |
| TC | HRGMv2_0786_38 | HRGMv2_0786_38_4 | 2902 | 3975 | + | 3.A.1.1.24 |
| STP | HRGMv2_0786_38 | HRGMv2_0786_38_5 | 4069 | 5850 | + | SBP_bac_1 |
| CAZyme | HRGMv2_0786_38 | HRGMv2_0786_38_6 | 5866 | 7683 | + | GH43 |
Gene ID: HRGMv2_0786_38_3
Type: TC
Location: 1968 - 2912 (+)
Type: TC
Location: 1968 - 2912 (+)
Gene ID: HRGMv2_0786_38_4
Type: TC
Location: 2902 - 3975 (+)
Type: TC
Location: 2902 - 3975 (+)
Gene ID: HRGMv2_0786_38_5
Type: STP
Location: 4069 - 5850 (+)
Type: STP
Location: 4069 - 5850 (+)
Gene ID: HRGMv2_0786_38_6
Type: CAZyme
Location: 5866 - 7683 (+)
Type: CAZyme
Location: 5866 - 7683 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.