Cluster: HRGMv2_0786_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0786
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0786_36 | HRGMv2_0786_36_1 | 312 | 2963 | + | GH51_2 |
| TC | HRGMv2_0786_36 | HRGMv2_0786_36_2 | 3040 | 3879 | + | 9.B.70.1.1 |
| pfam | HRGMv2_0786_36 | HRGMv2_0786_36_3 | 3866 | 4336 | + | Spore_III_AB |
| pfam | HRGMv2_0786_36 | HRGMv2_0786_36_4 | 4337 | 4534 | + | SpoIIIAC |
| TC | HRGMv2_0786_36 | HRGMv2_0786_36_5 | 4531 | 4932 | + | 9.B.70.1.1 |
| TC | HRGMv2_0786_36 | HRGMv2_0786_36_6 | 4929 | 6146 | + | 9.B.70.1.1 |
Gene ID: HRGMv2_0786_36_1
Type: CAZyme
Location: 312 - 2963 (+)
Type: CAZyme
Location: 312 - 2963 (+)
Gene ID: HRGMv2_0786_36_2
Type: TC
Location: 3040 - 3879 (+)
Type: TC
Location: 3040 - 3879 (+)
Gene ID: HRGMv2_0786_36_3
Type: pfam
Location: 3866 - 4336 (+)
Type: pfam
Location: 3866 - 4336 (+)
Gene ID: HRGMv2_0786_36_4
Type: pfam
Location: 4337 - 4534 (+)
Type: pfam
Location: 4337 - 4534 (+)
Gene ID: HRGMv2_0786_36_5
Type: TC
Location: 4531 - 4932 (+)
Type: TC
Location: 4531 - 4932 (+)
Gene ID: HRGMv2_0786_36_6
Type: TC
Location: 4929 - 6146 (+)
Type: TC
Location: 4929 - 6146 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.