Cluster: HRGMv2_0786_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0786
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0786_31 | HRGMv2_0786_31_1 | 3 | 1064 | - | 3.A.1.1.29 |
| TC | HRGMv2_0786_31 | HRGMv2_0786_31_2 | 1066 | 2058 | - | 3.A.1.1.9 |
| TF | HRGMv2_0786_31 | HRGMv2_0786_31_3 | 2154 | 3188 | - | LacI |
| STP | HRGMv2_0786_31 | HRGMv2_0786_31_4 | 3185 | 4105 | - | PfkB |
| TC | HRGMv2_0786_31 | HRGMv2_0786_31_5 | 4392 | 4919 | - | 1.A.22.1.8 |
| CAZyme | HRGMv2_0786_31 | HRGMv2_0786_31_6 | 4923 | 6407 | - | GH77 |
Gene ID: HRGMv2_0786_31_1
Type: TC
Location: 3 - 1064 (-)
Type: TC
Location: 3 - 1064 (-)
Gene ID: HRGMv2_0786_31_2
Type: TC
Location: 1066 - 2058 (-)
Type: TC
Location: 1066 - 2058 (-)
Gene ID: HRGMv2_0786_31_3
Type: TF
Location: 2154 - 3188 (-)
Type: TF
Location: 2154 - 3188 (-)
Gene ID: HRGMv2_0786_31_4
Type: STP
Location: 3185 - 4105 (-)
Type: STP
Location: 3185 - 4105 (-)
Gene ID: HRGMv2_0786_31_5
Type: TC
Location: 4392 - 4919 (-)
Type: TC
Location: 4392 - 4919 (-)
Gene ID: HRGMv2_0786_31_6
Type: CAZyme
Location: 4923 - 6407 (-)
Type: CAZyme
Location: 4923 - 6407 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.