Cluster: HRGMv2_0786_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0786
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0786_28 | HRGMv2_0786_28_8 | 10353 | 11261 | + | 3.A.1.1.20 |
| TC | HRGMv2_0786_28 | HRGMv2_0786_28_9 | 11261 | 12226 | + | 3.A.1.1.34 |
| NULL(UNKNOWN) | HRGMv2_0786_28 | HRGMv2_0786_28_10 | 12253 | 14979 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0786_28 | HRGMv2_0786_28_11 | 14992 | 16329 | + | GH125 |
| CAZyme | HRGMv2_0786_28 | HRGMv2_0786_28_12 | 16326 | 17561 | + | GH76 |
| CAZyme | HRGMv2_0786_28 | HRGMv2_0786_28_13 | 17564 | 19234 | + | GH76 |
Gene ID: HRGMv2_0786_28_8
Type: TC
Location: 10353 - 11261 (+)
Type: TC
Location: 10353 - 11261 (+)
Gene ID: HRGMv2_0786_28_9
Type: TC
Location: 11261 - 12226 (+)
Type: TC
Location: 11261 - 12226 (+)
Gene ID: HRGMv2_0786_28_10
Type:
Location: 12253 - 14979 (+)
Type:
Location: 12253 - 14979 (+)
Gene ID: HRGMv2_0786_28_11
Type: CAZyme
Location: 14992 - 16329 (+)
Type: CAZyme
Location: 14992 - 16329 (+)
Gene ID: HRGMv2_0786_28_12
Type: CAZyme
Location: 16326 - 17561 (+)
Type: CAZyme
Location: 16326 - 17561 (+)
Gene ID: HRGMv2_0786_28_13
Type: CAZyme
Location: 17564 - 19234 (+)
Type: CAZyme
Location: 17564 - 19234 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.