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Cluster: HRGMv2_0786_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0786_24 HRGMv2_0786_24_7 5051 6802 + GH13_14
pfam HRGMv2_0786_24 HRGMv2_0786_24_8 6861 8114 + SBP_bac_8
TC HRGMv2_0786_24 HRGMv2_0786_24_9 8188 9693 + 3.A.1.1.27
TC HRGMv2_0786_24 HRGMv2_0786_24_10 9695 10573 + 3.A.1.1.27
CAZyme HRGMv2_0786_24 HRGMv2_0786_24_11 10604 12112 + GH13_36
TC HRGMv2_0786_24 HRGMv2_0786_24_12 12131 14029 + 3.A.1.1.26
CAZyme HRGMv2_0786_24 HRGMv2_0786_24_13 14128 16404 + GT35
CAZyme HRGMv2_0786_24 HRGMv2_0786_24_14 16407 17909 + GH77
Gene ID: HRGMv2_0786_24_7
Type: CAZyme
Location: 5051 - 6802 (+)
Gene ID: HRGMv2_0786_24_8
Type: pfam
Location: 6861 - 8114 (+)
Gene ID: HRGMv2_0786_24_9
Type: TC
Location: 8188 - 9693 (+)
Gene ID: HRGMv2_0786_24_10
Type: TC
Location: 9695 - 10573 (+)
Gene ID: HRGMv2_0786_24_11
Type: CAZyme
Location: 10604 - 12112 (+)
Gene ID: HRGMv2_0786_24_12
Type: TC
Location: 12131 - 14029 (+)
Gene ID: HRGMv2_0786_24_13
Type: CAZyme
Location: 14128 - 16404 (+)
Gene ID: HRGMv2_0786_24_14
Type: CAZyme
Location: 16407 - 17909 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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