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Cluster: HRGMv2_0786_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0786_17 HRGMv2_0786_17_28 27630 28157 - GH23
pfam HRGMv2_0786_17 HRGMv2_0786_17_29 28204 28785 - CoaE
sulfatase HRGMv2_0786_17 HRGMv2_0786_17_30 28772 31339 - S1_2
CAZyme HRGMv2_0786_17 HRGMv2_0786_17_31 31750 32595 - GH43_17
NULL(UNKNOWN) HRGMv2_0786_17 HRGMv2_0786_17_32 33020 36187 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0786_17 HRGMv2_0786_17_33 36209 38167 + GH42
TF HRGMv2_0786_17 HRGMv2_0786_17_34 38174 39043 + HTH_AraC
TC HRGMv2_0786_17 HRGMv2_0786_17_35 39040 40038 + 3.A.1.1.29
TC HRGMv2_0786_17 HRGMv2_0786_17_36 40050 40970 + 3.A.1.1.10
Gene ID: HRGMv2_0786_17_28
Type: CAZyme
Location: 27630 - 28157 (-)
Gene ID: HRGMv2_0786_17_29
Type: pfam
Location: 28204 - 28785 (-)
Gene ID: HRGMv2_0786_17_30
Type: sulfatase
Location: 28772 - 31339 (-)
Gene ID: HRGMv2_0786_17_31
Type: CAZyme
Location: 31750 - 32595 (-)
Gene ID: HRGMv2_0786_17_32
Type:
Location: 33020 - 36187 (+)
Gene ID: HRGMv2_0786_17_33
Type: CAZyme
Location: 36209 - 38167 (+)
Gene ID: HRGMv2_0786_17_34
Type: TF
Location: 38174 - 39043 (+)
Gene ID: HRGMv2_0786_17_35
Type: TC
Location: 39040 - 40038 (+)
Gene ID: HRGMv2_0786_17_36
Type: TC
Location: 40050 - 40970 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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