Cluster: HRGMv2_0786_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0786
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0786_2 | HRGMv2_0786_2_57 | 58952 | 60868 | + | 3.A.3.6.10 |
| CAZyme | HRGMv2_0786_2 | HRGMv2_0786_2_58 | 61148 | 62491 | - | GH1 |
| NULL(UNKNOWN) | HRGMv2_0786_2 | HRGMv2_0786_2_59 | 62501 | 65989 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0786_2 | HRGMv2_0786_2_60 | 66002 | 67144 | - | GH10 |
| TC | HRGMv2_0786_2 | HRGMv2_0786_2_61 | 67165 | 68085 | - | 3.A.1.1.36 |
| TC | HRGMv2_0786_2 | HRGMv2_0786_2_62 | 68085 | 69131 | - | 3.A.1.1.4 |
Gene ID: HRGMv2_0786_2_57
Type: TC
Location: 58952 - 60868 (+)
Type: TC
Location: 58952 - 60868 (+)
Gene ID: HRGMv2_0786_2_58
Type: CAZyme
Location: 61148 - 62491 (-)
Type: CAZyme
Location: 61148 - 62491 (-)
Gene ID: HRGMv2_0786_2_59
Type:
Location: 62501 - 65989 (-)
Type:
Location: 62501 - 65989 (-)
Gene ID: HRGMv2_0786_2_60
Type: CAZyme
Location: 66002 - 67144 (-)
Type: CAZyme
Location: 66002 - 67144 (-)
Gene ID: HRGMv2_0786_2_61
Type: TC
Location: 67165 - 68085 (-)
Type: TC
Location: 67165 - 68085 (-)
Gene ID: HRGMv2_0786_2_62
Type: TC
Location: 68085 - 69131 (-)
Type: TC
Location: 68085 - 69131 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.