Cluster: HRGMv2_0786_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0786
- CGC Family ID: CGCFAM_00509
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0786_16 | HRGMv2_0786_16_20 | 23822 | 25330 | + | GH51_1 |
| NULL(UNKNOWN) | HRGMv2_0786_16 | HRGMv2_0786_16_21 | 25387 | 25497 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_0786_16 | HRGMv2_0786_16_22 | 25500 | 26837 | + | SBP_bac_1 |
| TC | HRGMv2_0786_16 | HRGMv2_0786_16_23 | 26855 | 27823 | + | 3.A.1.1.11 |
| TC | HRGMv2_0786_16 | HRGMv2_0786_16_24 | 27834 | 28751 | + | 3.A.1.1.11 |
Gene ID: HRGMv2_0786_16_20
Type: CAZyme
Location: 23822 - 25330 (+)
Type: CAZyme
Location: 23822 - 25330 (+)
Gene ID: HRGMv2_0786_16_21
Type:
Location: 25387 - 25497 (+)
Type:
Location: 25387 - 25497 (+)
Gene ID: HRGMv2_0786_16_22
Type: STP
Location: 25500 - 26837 (+)
Type: STP
Location: 25500 - 26837 (+)
Gene ID: HRGMv2_0786_16_23
Type: TC
Location: 26855 - 27823 (+)
Type: TC
Location: 26855 - 27823 (+)
Gene ID: HRGMv2_0786_16_24
Type: TC
Location: 27834 - 28751 (+)
Type: TC
Location: 27834 - 28751 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.