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Cluster: HRGMv2_0786_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0786_16 HRGMv2_0786_16_6 5123 6358 + GH93
STP HRGMv2_0786_16 HRGMv2_0786_16_7 6375 7865 + SBP_bac_1
TC HRGMv2_0786_16 HRGMv2_0786_16_8 7877 8767 + 3.A.1.1.20
TC HRGMv2_0786_16 HRGMv2_0786_16_9 8778 9635 + 3.A.1.1.20
pfam HRGMv2_0786_16 HRGMv2_0786_16_10 9657 12536 + CBM_X2
CAZyme HRGMv2_0786_16 HRGMv2_0786_16_11 12556 14316 + GH2
CAZyme HRGMv2_0786_16 HRGMv2_0786_16_12 14319 15416 + GH5_13
CAZyme HRGMv2_0786_16 HRGMv2_0786_16_13 15413 18250 + CBM67 | GH78
Gene ID: HRGMv2_0786_16_6
Type: CAZyme
Location: 5123 - 6358 (+)
Gene ID: HRGMv2_0786_16_7
Type: STP
Location: 6375 - 7865 (+)
Gene ID: HRGMv2_0786_16_8
Type: TC
Location: 7877 - 8767 (+)
Gene ID: HRGMv2_0786_16_9
Type: TC
Location: 8778 - 9635 (+)
Gene ID: HRGMv2_0786_16_10
Type: pfam
Location: 9657 - 12536 (+)
Gene ID: HRGMv2_0786_16_11
Type: CAZyme
Location: 12556 - 14316 (+)
Gene ID: HRGMv2_0786_16_12
Type: CAZyme
Location: 14319 - 15416 (+)
Gene ID: HRGMv2_0786_16_13
Type: CAZyme
Location: 15413 - 18250 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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