Cluster: HRGMv2_0786_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0786
- CGC Family ID: CGCFAM_02128
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0786_15 | HRGMv2_0786_15_24 | 28528 | 33792 | - | GH28 |
| pfam | HRGMv2_0786_15 | HRGMv2_0786_15_25 | 33805 | 37560 | - | Big_3 | Flg_new |
| CAZyme | HRGMv2_0786_15 | HRGMv2_0786_15_26 | 37587 | 39596 | - | GH3 |
| CAZyme | HRGMv2_0786_15 | HRGMv2_0786_15_27 | 39630 | 42626 | - | GH38 |
| NULL(UNKNOWN) | HRGMv2_0786_15 | HRGMv2_0786_15_28 | 42636 | 44750 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0786_15 | HRGMv2_0786_15_29 | 44762 | 45607 | - | 3.A.1.1.11 |
| TC | HRGMv2_0786_15 | HRGMv2_0786_15_30 | 45618 | 46532 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_0786_15_24
Type: CAZyme
Location: 28528 - 33792 (-)
Type: CAZyme
Location: 28528 - 33792 (-)
Gene ID: HRGMv2_0786_15_25
Type: pfam
Location: 33805 - 37560 (-)
Type: pfam
Location: 33805 - 37560 (-)
Gene ID: HRGMv2_0786_15_26
Type: CAZyme
Location: 37587 - 39596 (-)
Type: CAZyme
Location: 37587 - 39596 (-)
Gene ID: HRGMv2_0786_15_27
Type: CAZyme
Location: 39630 - 42626 (-)
Type: CAZyme
Location: 39630 - 42626 (-)
Gene ID: HRGMv2_0786_15_28
Type:
Location: 42636 - 44750 (-)
Type:
Location: 42636 - 44750 (-)
Gene ID: HRGMv2_0786_15_29
Type: TC
Location: 44762 - 45607 (-)
Type: TC
Location: 44762 - 45607 (-)
Gene ID: HRGMv2_0786_15_30
Type: TC
Location: 45618 - 46532 (-)
Type: TC
Location: 45618 - 46532 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.