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Cluster: HRGMv2_0786_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0786_15 HRGMv2_0786_15_7 7347 9275 - GH51_2
STP HRGMv2_0786_15 HRGMv2_0786_15_8 9378 10751 - HATPase_c | HisKA
TF HRGMv2_0786_15 HRGMv2_0786_15_9 10850 11500 - Trans_reg_C
TC HRGMv2_0786_15 HRGMv2_0786_15_10 11505 13154 - 2.A.58.2.2
pfam HRGMv2_0786_15 HRGMv2_0786_15_11 13323 13979 - PhoU | PhoU
TC HRGMv2_0786_15 HRGMv2_0786_15_12 14037 14903 - 3.A.1.7.5
TC HRGMv2_0786_15 HRGMv2_0786_15_13 14913 16742 - 3.A.1.7.5
Gene ID: HRGMv2_0786_15_7
Type: CAZyme
Location: 7347 - 9275 (-)
Gene ID: HRGMv2_0786_15_8
Type: STP
Location: 9378 - 10751 (-)
Gene ID: HRGMv2_0786_15_9
Type: TF
Location: 10850 - 11500 (-)
Gene ID: HRGMv2_0786_15_10
Type: TC
Location: 11505 - 13154 (-)
Gene ID: HRGMv2_0786_15_11
Type: pfam
Location: 13323 - 13979 (-)
Gene ID: HRGMv2_0786_15_12
Type: TC
Location: 14037 - 14903 (-)
Gene ID: HRGMv2_0786_15_13
Type: TC
Location: 14913 - 16742 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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