Cluster: HRGMv2_0786_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0786
- CGC Family ID: CGCFAM_06032
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0786_14 | HRGMv2_0786_14_3 | 1274 | 3430 | - | GH36 |
| pfam | HRGMv2_0786_14 | HRGMv2_0786_14_4 | 3437 | 4711 | - | FAD_binding_2 | GIDA | FAD_oxidored | NAD_binding_8 |
| CAZyme | HRGMv2_0786_14 | HRGMv2_0786_14_5 | 4720 | 7149 | - | GH94 |
| CAZyme | HRGMv2_0786_14 | HRGMv2_0786_14_6 | 7146 | 8777 | - | GH20 |
| CAZyme | HRGMv2_0786_14 | HRGMv2_0786_14_7 | 8798 | 10792 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_0786_14 | HRGMv2_0786_14_8 | 10789 | 13620 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0786_14 | HRGMv2_0786_14_9 | 13617 | 14591 | - | 3.A.1.1.49 |
Gene ID: HRGMv2_0786_14_3
Type: CAZyme
Location: 1274 - 3430 (-)
Type: CAZyme
Location: 1274 - 3430 (-)
Gene ID: HRGMv2_0786_14_4
Type: pfam
Location: 3437 - 4711 (-)
Type: pfam
Location: 3437 - 4711 (-)
Gene ID: HRGMv2_0786_14_5
Type: CAZyme
Location: 4720 - 7149 (-)
Type: CAZyme
Location: 4720 - 7149 (-)
Gene ID: HRGMv2_0786_14_6
Type: CAZyme
Location: 7146 - 8777 (-)
Type: CAZyme
Location: 7146 - 8777 (-)
Gene ID: HRGMv2_0786_14_7
Type: CAZyme
Location: 8798 - 10792 (-)
Type: CAZyme
Location: 8798 - 10792 (-)
Gene ID: HRGMv2_0786_14_8
Type:
Location: 10789 - 13620 (-)
Type:
Location: 10789 - 13620 (-)
Gene ID: HRGMv2_0786_14_9
Type: TC
Location: 13617 - 14591 (-)
Type: TC
Location: 13617 - 14591 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.