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Cluster: HRGMv2_0786_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0786_13 HRGMv2_0786_13_22 23238 24983 + 3.A.2.1.5
TC HRGMv2_0786_13 HRGMv2_0786_13_23 24980 25879 + 3.A.2.1.1
TC HRGMv2_0786_13 HRGMv2_0786_13_24 25876 27276 + 3.A.2.1.5
pfam HRGMv2_0786_13 HRGMv2_0786_13_25 27278 27685 + ATP-synt_DE | ATP-synt_DE_N
CAZyme HRGMv2_0786_13 HRGMv2_0786_13_26 27918 29879 + GH31_4
pfam HRGMv2_0786_13 HRGMv2_0786_13_27 29930 30568 - Hydrolase | HAD | Hydrolase_like | HAD_2
TC HRGMv2_0786_13 HRGMv2_0786_13_28 30630 32633 + 3.A.11.1.3
Gene ID: HRGMv2_0786_13_22
Type: TC
Location: 23238 - 24983 (+)
Gene ID: HRGMv2_0786_13_23
Type: TC
Location: 24980 - 25879 (+)
Gene ID: HRGMv2_0786_13_24
Type: TC
Location: 25876 - 27276 (+)
Gene ID: HRGMv2_0786_13_25
Type: pfam
Location: 27278 - 27685 (+)
Gene ID: HRGMv2_0786_13_26
Type: CAZyme
Location: 27918 - 29879 (+)
Gene ID: HRGMv2_0786_13_27
Type: pfam
Location: 29930 - 30568 (-)
Gene ID: HRGMv2_0786_13_28
Type: TC
Location: 30630 - 32633 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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