Cluster: HRGMv2_0786_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0786
- CGC Family ID: CGCFAM_00692
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0786_12 | HRGMv2_0786_12_46 | 53386 | 54417 | + | GH33 |
| TF | HRGMv2_0786_12 | HRGMv2_0786_12_47 | 54445 | 55245 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_0786_12 | HRGMv2_0786_12_48 | 55393 | 56364 | + | 3.A.1.1.9 |
| TC | HRGMv2_0786_12 | HRGMv2_0786_12_49 | 56364 | 57242 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_0786_12_46
Type: CAZyme
Location: 53386 - 54417 (+)
Type: CAZyme
Location: 53386 - 54417 (+)
Gene ID: HRGMv2_0786_12_47
Type: TF
Location: 54445 - 55245 (-)
Type: TF
Location: 54445 - 55245 (-)
Gene ID: HRGMv2_0786_12_48
Type: TC
Location: 55393 - 56364 (+)
Type: TC
Location: 55393 - 56364 (+)
Gene ID: HRGMv2_0786_12_49
Type: TC
Location: 56364 - 57242 (+)
Type: TC
Location: 56364 - 57242 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.