Cluster: HRGMv2_0786_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0786
- CGC Family ID: CGCFAM_09794
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0786_12 | HRGMv2_0786_12_14 | 13331 | 16354 | + | GH146 |
| pfam | HRGMv2_0786_12 | HRGMv2_0786_12_15 | 16449 | 19985 | - | POR | POR_N | TPP_enzyme_C | EKR | Fer4_7 | PFOR_II |
| TC | HRGMv2_0786_12 | HRGMv2_0786_12_16 | 20444 | 21268 | + | 3.A.1.26.7 |
| TC | HRGMv2_0786_12 | HRGMv2_0786_12_17 | 21256 | 22191 | + | 3.A.1.26.9 |
| TC | HRGMv2_0786_12 | HRGMv2_0786_12_18 | 22188 | 23000 | + | 3.A.1.26.10 |
Gene ID: HRGMv2_0786_12_14
Type: CAZyme
Location: 13331 - 16354 (+)
Type: CAZyme
Location: 13331 - 16354 (+)
Gene ID: HRGMv2_0786_12_15
Type: pfam
Location: 16449 - 19985 (-)
Type: pfam
Location: 16449 - 19985 (-)
Gene ID: HRGMv2_0786_12_16
Type: TC
Location: 20444 - 21268 (+)
Type: TC
Location: 20444 - 21268 (+)
Gene ID: HRGMv2_0786_12_17
Type: TC
Location: 21256 - 22191 (+)
Type: TC
Location: 21256 - 22191 (+)
Gene ID: HRGMv2_0786_12_18
Type: TC
Location: 22188 - 23000 (+)
Type: TC
Location: 22188 - 23000 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.