Cluster: HRGMv2_0786_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0786
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0786_11 | HRGMv2_0786_11_48 | 52952 | 54190 | + | 3.A.1.1.34 |
| TC | HRGMv2_0786_11 | HRGMv2_0786_11_49 | 54204 | 55265 | + | 3.A.1.1.18 |
| CAZyme | HRGMv2_0786_11 | HRGMv2_0786_11_50 | 55377 | 56942 | + | GH43_4 |
| CAZyme | HRGMv2_0786_11 | HRGMv2_0786_11_51 | 57026 | 58525 | + | GH43_4 |
Gene ID: HRGMv2_0786_11_48
Type: TC
Location: 52952 - 54190 (+)
Type: TC
Location: 52952 - 54190 (+)
Gene ID: HRGMv2_0786_11_49
Type: TC
Location: 54204 - 55265 (+)
Type: TC
Location: 54204 - 55265 (+)
Gene ID: HRGMv2_0786_11_50
Type: CAZyme
Location: 55377 - 56942 (+)
Type: CAZyme
Location: 55377 - 56942 (+)
Gene ID: HRGMv2_0786_11_51
Type: CAZyme
Location: 57026 - 58525 (+)
Type: CAZyme
Location: 57026 - 58525 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.