Cluster: HRGMv2_0786_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0786
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0786_1 | HRGMv2_0786_1_10 | 11353 | 13521 | + | GH36 |
| TC | HRGMv2_0786_1 | HRGMv2_0786_1_11 | 13610 | 14788 | + | 2.A.1.60.3 |
| pfam | HRGMv2_0786_1 | HRGMv2_0786_1_12 | 14826 | 15452 | - | SIMPL |
| TC | HRGMv2_0786_1 | HRGMv2_0786_1_13 | 15466 | 16218 | - | 9.B.143.2.3 |
Gene ID: HRGMv2_0786_1_10
Type: CAZyme
Location: 11353 - 13521 (+)
Type: CAZyme
Location: 11353 - 13521 (+)
Gene ID: HRGMv2_0786_1_11
Type: TC
Location: 13610 - 14788 (+)
Type: TC
Location: 13610 - 14788 (+)
Gene ID: HRGMv2_0786_1_12
Type: pfam
Location: 14826 - 15452 (-)
Type: pfam
Location: 14826 - 15452 (-)
Gene ID: HRGMv2_0786_1_13
Type: TC
Location: 15466 - 16218 (-)
Type: TC
Location: 15466 - 16218 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.