Cluster: HRGMv2_0784_CGC6
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_0784
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0784_31 | HRGMv2_0784_31_6 | 5640 | 6719 | - | GH36 |
| CAZyme | HRGMv2_0784_31 | HRGMv2_0784_31_7 | 6716 | 7744 | - | GH36 |
| pfam | HRGMv2_0784_31 | HRGMv2_0784_31_8 | 7741 | 8802 | - | URO-D |
| NULL(UNKNOWN) | HRGMv2_0784_31 | HRGMv2_0784_31_9 | 8848 | 9957 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0784_31 | HRGMv2_0784_31_10 | 9957 | 11456 | - | GH4 |
| CAZyme | HRGMv2_0784_31 | HRGMv2_0784_31_11 | 11461 | 14490 | - | GH38 |
| NULL(UNKNOWN) | HRGMv2_0784_31 | HRGMv2_0784_31_12 | 14515 | 16659 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0784_31 | HRGMv2_0784_31_13 | 16701 | 17777 | - | GH172 |
| NULL(UNKNOWN) | HRGMv2_0784_31 | HRGMv2_0784_31_14 | 17764 | 17874 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0784_31 | HRGMv2_0784_31_15 | 17871 | 19700 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0784_31 | HRGMv2_0784_31_16 | 19697 | 21748 | - | GH36 |
| CAZyme | HRGMv2_0784_31 | HRGMv2_0784_31_17 | 21745 | 24165 | - | GH116 |
| CAZyme | HRGMv2_0784_31 | HRGMv2_0784_31_18 | 24221 | 25537 | - | GH4 |
| TC | HRGMv2_0784_31 | HRGMv2_0784_31_19 | 25617 | 26486 | - | 3.A.1.1.20 |
| TC | HRGMv2_0784_31 | HRGMv2_0784_31_20 | 26486 | 27418 | - | 3.A.1.1.34 |
| pfam | HRGMv2_0784_31 | HRGMv2_0784_31_21 | 27540 | 29213 | - | SBP_bac_8 |
| TC | HRGMv2_0784_31 | HRGMv2_0784_31_22 | 29514 | 31250 | + | 9.B.33.1.1 |
Gene ID: HRGMv2_0784_31_6
Type: CAZyme
Location: 5640 - 6719 (-)
Type: CAZyme
Location: 5640 - 6719 (-)
Gene ID: HRGMv2_0784_31_7
Type: CAZyme
Location: 6716 - 7744 (-)
Type: CAZyme
Location: 6716 - 7744 (-)
Gene ID: HRGMv2_0784_31_8
Type: pfam
Location: 7741 - 8802 (-)
Type: pfam
Location: 7741 - 8802 (-)
Gene ID: HRGMv2_0784_31_9
Type:
Location: 8848 - 9957 (-)
Type:
Location: 8848 - 9957 (-)
Gene ID: HRGMv2_0784_31_10
Type: CAZyme
Location: 9957 - 11456 (-)
Type: CAZyme
Location: 9957 - 11456 (-)
Gene ID: HRGMv2_0784_31_11
Type: CAZyme
Location: 11461 - 14490 (-)
Type: CAZyme
Location: 11461 - 14490 (-)
Gene ID: HRGMv2_0784_31_12
Type:
Location: 14515 - 16659 (-)
Type:
Location: 14515 - 16659 (-)
Gene ID: HRGMv2_0784_31_13
Type: CAZyme
Location: 16701 - 17777 (-)
Type: CAZyme
Location: 16701 - 17777 (-)
Gene ID: HRGMv2_0784_31_14
Type:
Location: 17764 - 17874 (-)
Type:
Location: 17764 - 17874 (-)
Gene ID: HRGMv2_0784_31_15
Type:
Location: 17871 - 19700 (-)
Type:
Location: 17871 - 19700 (-)
Gene ID: HRGMv2_0784_31_16
Type: CAZyme
Location: 19697 - 21748 (-)
Type: CAZyme
Location: 19697 - 21748 (-)
Gene ID: HRGMv2_0784_31_17
Type: CAZyme
Location: 21745 - 24165 (-)
Type: CAZyme
Location: 21745 - 24165 (-)
Gene ID: HRGMv2_0784_31_18
Type: CAZyme
Location: 24221 - 25537 (-)
Type: CAZyme
Location: 24221 - 25537 (-)
Gene ID: HRGMv2_0784_31_19
Type: TC
Location: 25617 - 26486 (-)
Type: TC
Location: 25617 - 26486 (-)
Gene ID: HRGMv2_0784_31_20
Type: TC
Location: 26486 - 27418 (-)
Type: TC
Location: 26486 - 27418 (-)
Gene ID: HRGMv2_0784_31_21
Type: pfam
Location: 27540 - 29213 (-)
Type: pfam
Location: 27540 - 29213 (-)
Gene ID: HRGMv2_0784_31_22
Type: TC
Location: 29514 - 31250 (+)
Type: TC
Location: 29514 - 31250 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp958405585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.