Cluster: HRGMv2_0784_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0784
- CGC Family ID: CGCFAM_00824
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0784_29 | HRGMv2_0784_29_2 | 489 | 2675 | + | CBM67 | GH78 |
| CAZyme | HRGMv2_0784_29 | HRGMv2_0784_29_3 | 3131 | 4201 | + | GH179 |
| pfam | HRGMv2_0784_29 | HRGMv2_0784_29_4 | 4213 | 5280 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | KARI_N | GFO_IDH_MocA_C3 |
| pfam | HRGMv2_0784_29 | HRGMv2_0784_29_5 | 5284 | 6129 | + | AP_endonuc_2 |
| TC | HRGMv2_0784_29 | HRGMv2_0784_29_6 | 6149 | 7945 | + | 3.A.1.1.10 |
| TC | HRGMv2_0784_29 | HRGMv2_0784_29_7 | 7959 | 8834 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_0784_29_2
Type: CAZyme
Location: 489 - 2675 (+)
Type: CAZyme
Location: 489 - 2675 (+)
Gene ID: HRGMv2_0784_29_3
Type: CAZyme
Location: 3131 - 4201 (+)
Type: CAZyme
Location: 3131 - 4201 (+)
Gene ID: HRGMv2_0784_29_4
Type: pfam
Location: 4213 - 5280 (+)
Type: pfam
Location: 4213 - 5280 (+)
Gene ID: HRGMv2_0784_29_5
Type: pfam
Location: 5284 - 6129 (+)
Type: pfam
Location: 5284 - 6129 (+)
Gene ID: HRGMv2_0784_29_6
Type: TC
Location: 6149 - 7945 (+)
Type: TC
Location: 6149 - 7945 (+)
Gene ID: HRGMv2_0784_29_7
Type: TC
Location: 7959 - 8834 (+)
Type: TC
Location: 7959 - 8834 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp958405585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.