Cluster: HRGMv2_0784_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0784
- CGC Family ID: CGCFAM_00682
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0784_143 | HRGMv2_0784_143_3 | 4270 | 6177 | - | GH43 |
| TC | HRGMv2_0784_143 | HRGMv2_0784_143_4 | 6196 | 7077 | - | 3.A.1.1.34 |
| TC | HRGMv2_0784_143 | HRGMv2_0784_143_5 | 7074 | 7982 | - | 3.A.1.1.20 |
| STP | HRGMv2_0784_143 | HRGMv2_0784_143_6 | 8042 | 9862 | - | SBP_bac_1 |
| CAZyme | HRGMv2_0784_143 | HRGMv2_0784_143_7 | 9983 | 12607 | - | GH106 |
| TF | HRGMv2_0784_143 | HRGMv2_0784_143_8 | 12793 | 13650 | - | 0035607 |
| CAZyme | HRGMv2_0784_143 | HRGMv2_0784_143_9 | 13793 | 15805 | - | GH3 |
Gene ID: HRGMv2_0784_143_3
Type: CAZyme
Location: 4270 - 6177 (-)
Type: CAZyme
Location: 4270 - 6177 (-)
Gene ID: HRGMv2_0784_143_4
Type: TC
Location: 6196 - 7077 (-)
Type: TC
Location: 6196 - 7077 (-)
Gene ID: HRGMv2_0784_143_5
Type: TC
Location: 7074 - 7982 (-)
Type: TC
Location: 7074 - 7982 (-)
Gene ID: HRGMv2_0784_143_6
Type: STP
Location: 8042 - 9862 (-)
Type: STP
Location: 8042 - 9862 (-)
Gene ID: HRGMv2_0784_143_7
Type: CAZyme
Location: 9983 - 12607 (-)
Type: CAZyme
Location: 9983 - 12607 (-)
Gene ID: HRGMv2_0784_143_8
Type: TF
Location: 12793 - 13650 (-)
Type: TF
Location: 12793 - 13650 (-)
Gene ID: HRGMv2_0784_143_9
Type: CAZyme
Location: 13793 - 15805 (-)
Type: CAZyme
Location: 13793 - 15805 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp958405585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.