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Cluster: HRGMv2_0784_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0784_139 HRGMv2_0784_139_84 87153 88151 + 3.A.1.1.29
TC HRGMv2_0784_139 HRGMv2_0784_139_85 88148 89050 + 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_0784_139 HRGMv2_0784_139_86 89068 90708 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0784_139 HRGMv2_0784_139_87 90713 91192 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0784_139 HRGMv2_0784_139_88 91194 93014 + GH136
NULL(UNKNOWN) HRGMv2_0784_139 HRGMv2_0784_139_89 93036 96545 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0784_139 HRGMv2_0784_139_90 96612 98624 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0784_139 HRGMv2_0784_139_91 98635 100875 + GH2
Gene ID: HRGMv2_0784_139_84
Type: TC
Location: 87153 - 88151 (+)
Gene ID: HRGMv2_0784_139_85
Type: TC
Location: 88148 - 89050 (+)
Gene ID: HRGMv2_0784_139_86
Type:
Location: 89068 - 90708 (+)
Gene ID: HRGMv2_0784_139_87
Type:
Location: 90713 - 91192 (+)
Gene ID: HRGMv2_0784_139_88
Type: CAZyme
Location: 91194 - 93014 (+)
Gene ID: HRGMv2_0784_139_89
Type:
Location: 93036 - 96545 (+)
Gene ID: HRGMv2_0784_139_90
Type:
Location: 96612 - 98624 (+)
Gene ID: HRGMv2_0784_139_91
Type: CAZyme
Location: 98635 - 100875 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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