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Cluster: HRGMv2_0784_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0784_110 HRGMv2_0784_110_17 35042 36244 - 2.A.36.2.1
pfam HRGMv2_0784_110 HRGMv2_0784_110_18 36700 37977 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
NULL(UNKNOWN) HRGMv2_0784_110 HRGMv2_0784_110_19 38041 39171 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0784_110 HRGMv2_0784_110_20 39152 41404 - GH3
pfam HRGMv2_0784_110 HRGMv2_0784_110_21 41575 42258 - NMN_transporter
pfam HRGMv2_0784_110 HRGMv2_0784_110_22 42431 43699 - MFS_1
CAZyme HRGMv2_0784_110 HRGMv2_0784_110_23 43699 45078 - GH39
CAZyme HRGMv2_0784_110 HRGMv2_0784_110_24 45075 46685 - GH3
pfam HRGMv2_0784_110 HRGMv2_0784_110_25 46675 47379 - Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_0784_110 HRGMv2_0784_110_26 47381 49348 - GH151
CAZyme HRGMv2_0784_110 HRGMv2_0784_110_27 49376 51304 - GH163
Gene ID: HRGMv2_0784_110_17
Type: TC
Location: 35042 - 36244 (-)
Gene ID: HRGMv2_0784_110_18
Type: pfam
Location: 36700 - 37977 (-)
Gene ID: HRGMv2_0784_110_19
Type:
Location: 38041 - 39171 (-)
Gene ID: HRGMv2_0784_110_20
Type: CAZyme
Location: 39152 - 41404 (-)
Gene ID: HRGMv2_0784_110_21
Type: pfam
Location: 41575 - 42258 (-)
Gene ID: HRGMv2_0784_110_22
Type: pfam
Location: 42431 - 43699 (-)
Gene ID: HRGMv2_0784_110_23
Type: CAZyme
Location: 43699 - 45078 (-)
Gene ID: HRGMv2_0784_110_24
Type: CAZyme
Location: 45075 - 46685 (-)
Gene ID: HRGMv2_0784_110_25
Type: pfam
Location: 46675 - 47379 (-)
Gene ID: HRGMv2_0784_110_26
Type: CAZyme
Location: 47381 - 49348 (-)
Gene ID: HRGMv2_0784_110_27
Type: CAZyme
Location: 49376 - 51304 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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