Cluster: HRGMv2_0784_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0784
- CGC Family ID: CGCFAM_00228
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0784_110 | HRGMv2_0784_110_8 | 20482 | 21375 | - | 3.A.1.1.29 |
| TC | HRGMv2_0784_110 | HRGMv2_0784_110_9 | 21388 | 22962 | - | 3.A.1.1.29 |
| TF | HRGMv2_0784_110 | HRGMv2_0784_110_10 | 22913 | 23761 | - | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_0784_110 | HRGMv2_0784_110_11 | 23793 | 24881 | - | URO-D |
| CAZyme | HRGMv2_0784_110 | HRGMv2_0784_110_12 | 24874 | 26871 | - | GH78 |
Gene ID: HRGMv2_0784_110_8
Type: TC
Location: 20482 - 21375 (-)
Type: TC
Location: 20482 - 21375 (-)
Gene ID: HRGMv2_0784_110_9
Type: TC
Location: 21388 - 22962 (-)
Type: TC
Location: 21388 - 22962 (-)
Gene ID: HRGMv2_0784_110_10
Type: TF
Location: 22913 - 23761 (-)
Type: TF
Location: 22913 - 23761 (-)
Gene ID: HRGMv2_0784_110_11
Type: pfam
Location: 23793 - 24881 (-)
Type: pfam
Location: 23793 - 24881 (-)
Gene ID: HRGMv2_0784_110_12
Type: CAZyme
Location: 24874 - 26871 (-)
Type: CAZyme
Location: 24874 - 26871 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp958405585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.