Cluster: HRGMv2_0784_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0784
- CGC Family ID: CGCFAM_05236
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0784_94 | HRGMv2_0784_94_1 | 67 | 1404 | - | 2.A.37.2.2 |
| CAZyme | HRGMv2_0784_94 | HRGMv2_0784_94_2 | 1600 | 2913 | + | GH13_20 |
| TC | HRGMv2_0784_94 | HRGMv2_0784_94_3 | 3100 | 4482 | + | 2.A.66.1.33 |
| TC | HRGMv2_0784_94 | HRGMv2_0784_94_4 | 4709 | 6331 | + | 2.A.21.2.3 |
| NULL(UNKNOWN) | HRGMv2_0784_94 | HRGMv2_0784_94_5 | 6815 | 11170 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0784_94 | HRGMv2_0784_94_6 | 11706 | 13367 | + | HMGL-like | LeuA_dimer | IPMS_D2 |
| CAZyme | HRGMv2_0784_94 | HRGMv2_0784_94_7 | 13710 | 14993 | + | GT4 |
Gene ID: HRGMv2_0784_94_1
Type: TC
Location: 67 - 1404 (-)
Type: TC
Location: 67 - 1404 (-)
Gene ID: HRGMv2_0784_94_2
Type: CAZyme
Location: 1600 - 2913 (+)
Type: CAZyme
Location: 1600 - 2913 (+)
Gene ID: HRGMv2_0784_94_3
Type: TC
Location: 3100 - 4482 (+)
Type: TC
Location: 3100 - 4482 (+)
Gene ID: HRGMv2_0784_94_4
Type: TC
Location: 4709 - 6331 (+)
Type: TC
Location: 4709 - 6331 (+)
Gene ID: HRGMv2_0784_94_5
Type:
Location: 6815 - 11170 (+)
Type:
Location: 6815 - 11170 (+)
Gene ID: HRGMv2_0784_94_6
Type: pfam
Location: 11706 - 13367 (+)
Type: pfam
Location: 11706 - 13367 (+)
Gene ID: HRGMv2_0784_94_7
Type: CAZyme
Location: 13710 - 14993 (+)
Type: CAZyme
Location: 13710 - 14993 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp958405585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.