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Cluster: HRGMv2_0784_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0784_83 HRGMv2_0784_83_32 30479 31948 - GH77
CAZyme HRGMv2_0784_83 HRGMv2_0784_83_33 32058 34211 - CBM20 | GH13_2
NULL(UNKNOWN) HRGMv2_0784_83 HRGMv2_0784_83_34 34286 34735 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0784_83 HRGMv2_0784_83_35 34765 37011 - GT35
TC HRGMv2_0784_83 HRGMv2_0784_83_36 37013 37858 - 3.A.1.1.27
TC HRGMv2_0784_83 HRGMv2_0784_83_37 37855 39231 - 3.A.1.1.27
TC HRGMv2_0784_83 HRGMv2_0784_83_38 39244 40707 - 3.A.1.1.26
CAZyme HRGMv2_0784_83 HRGMv2_0784_83_39 40704 42413 - CBM34 | GH13_20
Gene ID: HRGMv2_0784_83_32
Type: CAZyme
Location: 30479 - 31948 (-)
Gene ID: HRGMv2_0784_83_33
Type: CAZyme
Location: 32058 - 34211 (-)
Gene ID: HRGMv2_0784_83_34
Type:
Location: 34286 - 34735 (-)
Gene ID: HRGMv2_0784_83_35
Type: CAZyme
Location: 34765 - 37011 (-)
Gene ID: HRGMv2_0784_83_36
Type: TC
Location: 37013 - 37858 (-)
Gene ID: HRGMv2_0784_83_37
Type: TC
Location: 37855 - 39231 (-)
Gene ID: HRGMv2_0784_83_38
Type: TC
Location: 39244 - 40707 (-)
Gene ID: HRGMv2_0784_83_39
Type: CAZyme
Location: 40704 - 42413 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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