Cluster: HRGMv2_0784_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0784
- CGC Family ID: CGCFAM_03656
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0784_80 | HRGMv2_0784_80_14 | 17710 | 18807 | + | 2.A.19.5.2 |
| NULL(UNKNOWN) | HRGMv2_0784_80 | HRGMv2_0784_80_15 | 18850 | 19098 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0784_80 | HRGMv2_0784_80_16 | 19091 | 19669 | + | 2.A.115.2.14 |
| pfam | HRGMv2_0784_80 | HRGMv2_0784_80_17 | 19861 | 20922 | + | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M |
| CAZyme | HRGMv2_0784_80 | HRGMv2_0784_80_18 | 20941 | 23403 | + | GH3 |
Gene ID: HRGMv2_0784_80_14
Type: TC
Location: 17710 - 18807 (+)
Type: TC
Location: 17710 - 18807 (+)
Gene ID: HRGMv2_0784_80_15
Type:
Location: 18850 - 19098 (+)
Type:
Location: 18850 - 19098 (+)
Gene ID: HRGMv2_0784_80_16
Type: TC
Location: 19091 - 19669 (+)
Type: TC
Location: 19091 - 19669 (+)
Gene ID: HRGMv2_0784_80_17
Type: pfam
Location: 19861 - 20922 (+)
Type: pfam
Location: 19861 - 20922 (+)
Gene ID: HRGMv2_0784_80_18
Type: CAZyme
Location: 20941 - 23403 (+)
Type: CAZyme
Location: 20941 - 23403 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp958405585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.