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Cluster: HRGMv2_0784_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0784_76 HRGMv2_0784_76_44 53301 54245 + 8.A.5.1.4
pfam HRGMv2_0784_76 HRGMv2_0784_76_45 54242 54880 + Flavodoxin_2 | FMN_red
peptidase HRGMv2_0784_76 HRGMv2_0784_76_46 54886 56112 + S09.UPA
CAZyme HRGMv2_0784_76 HRGMv2_0784_76_47 56128 58029 + CE1
pfam HRGMv2_0784_76 HRGMv2_0784_76_48 58050 58787 + CMD
pfam HRGMv2_0784_76 HRGMv2_0784_76_49 59115 59411 + DUF1281_C
TC HRGMv2_0784_76 HRGMv2_0784_76_50 59412 59963 + 3.A.7.19.1
Gene ID: HRGMv2_0784_76_44
Type: TC
Location: 53301 - 54245 (+)
Gene ID: HRGMv2_0784_76_45
Type: pfam
Location: 54242 - 54880 (+)
Gene ID: HRGMv2_0784_76_46
Type: peptidase
Location: 54886 - 56112 (+)
Gene ID: HRGMv2_0784_76_47
Type: CAZyme
Location: 56128 - 58029 (+)
Gene ID: HRGMv2_0784_76_48
Type: pfam
Location: 58050 - 58787 (+)
Gene ID: HRGMv2_0784_76_49
Type: pfam
Location: 59115 - 59411 (+)
Gene ID: HRGMv2_0784_76_50
Type: TC
Location: 59412 - 59963 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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