Cluster: HRGMv2_0784_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0784
- CGC Family ID: CGCFAM_00350
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0784_76 | HRGMv2_0784_76_9 | 12902 | 13864 | + | 3.A.1.1.11 |
| TC | HRGMv2_0784_76 | HRGMv2_0784_76_10 | 13864 | 14754 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | HRGMv2_0784_76 | HRGMv2_0784_76_11 | 14764 | 16686 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0784_76 | HRGMv2_0784_76_12 | 16716 | 20426 | + | Big_2 | Big_2 | Big_3 | Big_3 |
| CAZyme | HRGMv2_0784_76 | HRGMv2_0784_76_13 | 20506 | 23055 | + | CBM67 | GH78 |
Gene ID: HRGMv2_0784_76_9
Type: TC
Location: 12902 - 13864 (+)
Type: TC
Location: 12902 - 13864 (+)
Gene ID: HRGMv2_0784_76_10
Type: TC
Location: 13864 - 14754 (+)
Type: TC
Location: 13864 - 14754 (+)
Gene ID: HRGMv2_0784_76_11
Type:
Location: 14764 - 16686 (+)
Type:
Location: 14764 - 16686 (+)
Gene ID: HRGMv2_0784_76_12
Type: pfam
Location: 16716 - 20426 (+)
Type: pfam
Location: 16716 - 20426 (+)
Gene ID: HRGMv2_0784_76_13
Type: CAZyme
Location: 20506 - 23055 (+)
Type: CAZyme
Location: 20506 - 23055 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp958405585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.