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Cluster: HRGMv2_0783_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0783_14 HRGMv2_0783_14_4 2438 3775 - 2.A.37.2.2
CAZyme HRGMv2_0783_14 HRGMv2_0783_14_5 3973 5286 + GH13_20
pfam HRGMv2_0783_14 HRGMv2_0783_14_6 5470 7332 + N_methyl
TC HRGMv2_0783_14 HRGMv2_0783_14_7 7517 8899 + 2.A.66.1.33
TC HRGMv2_0783_14 HRGMv2_0783_14_8 9120 10793 + 2.A.21.2.1
NULL(UNKNOWN) HRGMv2_0783_14 HRGMv2_0783_14_9 11187 15536 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0783_14 HRGMv2_0783_14_10 16044 17705 + HMGL-like | LeuA_dimer | IPMS_D2
CAZyme HRGMv2_0783_14 HRGMv2_0783_14_11 18195 19364 + GT4
Gene ID: HRGMv2_0783_14_4
Type: TC
Location: 2438 - 3775 (-)
Gene ID: HRGMv2_0783_14_5
Type: CAZyme
Location: 3973 - 5286 (+)
Gene ID: HRGMv2_0783_14_6
Type: pfam
Location: 5470 - 7332 (+)
Gene ID: HRGMv2_0783_14_7
Type: TC
Location: 7517 - 8899 (+)
Gene ID: HRGMv2_0783_14_8
Type: TC
Location: 9120 - 10793 (+)
Gene ID: HRGMv2_0783_14_9
Type:
Location: 11187 - 15536 (+)
Gene ID: HRGMv2_0783_14_10
Type: pfam
Location: 16044 - 17705 (+)
Gene ID: HRGMv2_0783_14_11
Type: CAZyme
Location: 18195 - 19364 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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