Cluster: HRGMv2_0783_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0783_12 | HRGMv2_0783_12_18 | 23285 | 24847 | + | 2.A.40.1.2 |
| TF | HRGMv2_0783_12 | HRGMv2_0783_12_19 | 25003 | 25782 | - | HTH_AraC |
| pfam | HRGMv2_0783_12 | HRGMv2_0783_12_20 | 25925 | 26686 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_0783_12 | HRGMv2_0783_12_21 | 27003 | 29999 | + | GH106 |
Gene ID: HRGMv2_0783_12_18
Type: TC
Location: 23285 - 24847 (+)
Type: TC
Location: 23285 - 24847 (+)
Gene ID: HRGMv2_0783_12_19
Type: TF
Location: 25003 - 25782 (-)
Type: TF
Location: 25003 - 25782 (-)
Gene ID: HRGMv2_0783_12_20
Type: pfam
Location: 25925 - 26686 (+)
Type: pfam
Location: 25925 - 26686 (+)
Gene ID: HRGMv2_0783_12_21
Type: CAZyme
Location: 27003 - 29999 (+)
Type: CAZyme
Location: 27003 - 29999 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp900557285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.