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Cluster: HRGMv2_0783_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0783_9 HRGMv2_0783_9_23 27236 28576 - 9.A.40.2.4
peptidase HRGMv2_0783_9 HRGMv2_0783_9_24 28724 29635 - C40.UPW
peptidase HRGMv2_0783_9 HRGMv2_0783_9_25 29769 30830 + S09.UPW
CAZyme HRGMv2_0783_9 HRGMv2_0783_9_26 31862 33739 + CBM48 | GH13_9
pfam HRGMv2_0783_9 HRGMv2_0783_9_27 33805 35010 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0783_9 HRGMv2_0783_9_28 35011 36117 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0783_9 HRGMv2_0783_9_29 36147 37796 + GT5
CAZyme HRGMv2_0783_9 HRGMv2_0783_9_30 37819 40254 + GT35
CAZyme HRGMv2_0783_9 HRGMv2_0783_9_31 40258 42063 + GH13_39
Gene ID: HRGMv2_0783_9_23
Type: TC
Location: 27236 - 28576 (-)
Gene ID: HRGMv2_0783_9_24
Type: peptidase
Location: 28724 - 29635 (-)
Gene ID: HRGMv2_0783_9_25
Type: peptidase
Location: 29769 - 30830 (+)
Gene ID: HRGMv2_0783_9_26
Type: CAZyme
Location: 31862 - 33739 (+)
Gene ID: HRGMv2_0783_9_27
Type: pfam
Location: 33805 - 35010 (+)
Gene ID: HRGMv2_0783_9_28
Type: pfam
Location: 35011 - 36117 (+)
Gene ID: HRGMv2_0783_9_29
Type: CAZyme
Location: 36147 - 37796 (+)
Gene ID: HRGMv2_0783_9_30
Type: CAZyme
Location: 37819 - 40254 (+)
Gene ID: HRGMv2_0783_9_31
Type: CAZyme
Location: 40258 - 42063 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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