Cluster: HRGMv2_0783_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0783
- CGC Family ID: CGCFAM_00350
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0783_8 | HRGMv2_0783_8_35 | 50032 | 50955 | + | 3.A.1.1.11 |
| TC | HRGMv2_0783_8 | HRGMv2_0783_8_36 | 50958 | 51845 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | HRGMv2_0783_8 | HRGMv2_0783_8_37 | 51855 | 53777 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0783_8 | HRGMv2_0783_8_38 | 53807 | 57526 | + | Big_2 | Big_2 | Big_3 |
| CAZyme | HRGMv2_0783_8 | HRGMv2_0783_8_39 | 57606 | 58790 | + | CBM67 |
Gene ID: HRGMv2_0783_8_35
Type: TC
Location: 50032 - 50955 (+)
Type: TC
Location: 50032 - 50955 (+)
Gene ID: HRGMv2_0783_8_36
Type: TC
Location: 50958 - 51845 (+)
Type: TC
Location: 50958 - 51845 (+)
Gene ID: HRGMv2_0783_8_37
Type:
Location: 51855 - 53777 (+)
Type:
Location: 51855 - 53777 (+)
Gene ID: HRGMv2_0783_8_38
Type: pfam
Location: 53807 - 57526 (+)
Type: pfam
Location: 53807 - 57526 (+)
Gene ID: HRGMv2_0783_8_39
Type: CAZyme
Location: 57606 - 58790 (+)
Type: CAZyme
Location: 57606 - 58790 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp900557285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.