Cluster: HRGMv2_0783_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0783
- CGC Family ID: CGCFAM_03656
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0783_63 | HRGMv2_0783_63_3 | 1771 | 2703 | + | 3.A.1.34.1 |
| TC | HRGMv2_0783_63 | HRGMv2_0783_63_4 | 2696 | 3469 | + | 3.A.1.34.1 |
| TC | HRGMv2_0783_63 | HRGMv2_0783_63_5 | 3580 | 4677 | + | 2.A.19.5.2 |
| TC | HRGMv2_0783_63 | HRGMv2_0783_63_6 | 4959 | 5537 | + | 2.A.115.2.14 |
| pfam | HRGMv2_0783_63 | HRGMv2_0783_63_7 | 5726 | 6787 | + | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M |
| CAZyme | HRGMv2_0783_63 | HRGMv2_0783_63_8 | 6806 | 9268 | + | GH3 |
Gene ID: HRGMv2_0783_63_3
Type: TC
Location: 1771 - 2703 (+)
Type: TC
Location: 1771 - 2703 (+)
Gene ID: HRGMv2_0783_63_4
Type: TC
Location: 2696 - 3469 (+)
Type: TC
Location: 2696 - 3469 (+)
Gene ID: HRGMv2_0783_63_5
Type: TC
Location: 3580 - 4677 (+)
Type: TC
Location: 3580 - 4677 (+)
Gene ID: HRGMv2_0783_63_6
Type: TC
Location: 4959 - 5537 (+)
Type: TC
Location: 4959 - 5537 (+)
Gene ID: HRGMv2_0783_63_7
Type: pfam
Location: 5726 - 6787 (+)
Type: pfam
Location: 5726 - 6787 (+)
Gene ID: HRGMv2_0783_63_8
Type: CAZyme
Location: 6806 - 9268 (+)
Type: CAZyme
Location: 6806 - 9268 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp900557285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.